Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015886387.1_cds_XP_016440512.1_35965
CDS Infomation

[gene=LOC107766274] [db_xref=GeneID:107766274] [protein=lysine--tRNA ligase-like] [protein_id=XP_016440512.1] [location=complement(join(50640..50677,50882..50958,51952..52007,52434..52577,52694..52762,52851..52994,54515..54671,54751..54847,54959..55241,55343..55468,55587..55649,55717..55826,56416..56501,57650..57743,57836..58007,58314..58436))] [gbkey=CDS]
Sequence

ATGGAGAACCCAGAAAAGAAGGGGAAATCTGAAAACAAGGACAAGAAGGGGAAATCTGAA
AACAAGCCAAGCACTCAGTCTCAAAAGCATGCTGCAGCCGGTGATGAGGACATGGATCCA
ACGCAATACTTTGAAAATAGGCTGAAAGCACTTGAGGCTGAGAAGGCAACCGGGAAGAAT
CCTTACCCACACAAATTCGAACACAAAGTTGAATTGTTGTCTATCCCTGATTATGTGAAG
AAATATGGAGTTTTAGAGAGCGGAGCTCATTCCGCTGATGAAGTGTCCTTGGCTGGAAGG
ATAATGAATAAACGCGCGTCTTCTGCAAAGCTGCTTTTCTATGATTTACATGGTGGAGGT
GCCAAAGTTCAAGTTATGGCAAGTGCGAGGGATTCTGAATTGAATGAAGACGTGTTTATT
AAATTTCATTCTGGTGTGAAGCGTGGAGATATTGTCGGAATTACTGGGTGTCCAGGAAAG
AGTAAACGGGGAGAGCTGAGTATTTTTCCCAAATCATTCGAAGTGTTGTCTCATTGTCTT
CATATGATGCCACGGCAGAAAGGTGCCCAGACGGATACGACTAAGAAAATTGAAGCATGG
GTCCCGGGAAGTGGCCGAAATCCAGATACATATGTTTTGAAAGATCAGGAAACCCGATAT
AGACAGCGTTATTTGGATTTGATGCTGAACTTAGAGATTCGGCACATATTTAAGACCCGA
ACAAAGATCATAACTTATATTCGTAGCTTTCTTGATAATCGTGACTTCTTAGAGGTAGAG
ACCCCCATGATGAACATGATTGCTGGTGGAGCAGCTGCACGCCCATTTGTGACCCACCAC
AATGATTTGAATATGAGGCTTTTCATGCGTATTGCTCCTGAACTATATCTTAAAGAGCTG
GTTGTTGGTGGATTGGATCGTGTCTATGAGATTGGGAAACAATTCAGAAATGAGGGAATT
GACTTGACACACAATCCTGAATTCACCACTTGCGAGTTCTATATGGCATATGCGGATTAC
AATGACTTGATGGATCTAACTGAAAAAATGCTAAGTGGGATGGTGAAGGAACTTACAGGT
GGCTATATAATCAAGTATCATGCAAAGGGGCTGGAGAATGACCCCATTGAGATTGACTTC
ACTCCTCCCTTCAGACGGATTGATATGGTAGAGGAATTGGAGAAGGTTGCAAACTTGAAT
ATACCCAAGGATCTCTCAAGTGTTGAAGCTAACAAATATCTCATAGACGCTTGTGCAAAG
CTTGAGATCAAATGTCCTCCTCCTCAAACAACAGCTAGATTACTTGATAAACTTGTAGGG
AACTTTCTGGAGGAGACATGTGTTAACCCTGCTTTTATCATCAACCATCCAGAGATAATG
AGTCCTTTGGCAAAGTGGCATAGATTGAAACCAGGCCTGACAGAACGTTTTGAATTGTTT
ATTAACAAGCACGAACTTTGCAATGCATACACTGAATTGAATGACCCTGTTGTCCAACGC
CAGCGTTTTGCTGATCAACTCAAGGACCGACAATCAGGTGACGATGAAGCTATGGCACTG
GATGAGAACTTTTGTACAGCTCTTGAATATGGATTACCTCCTACTGGTGGTTGGGGATTG
GGTATTGACCGACTTGCAATGTTGTTAACAGATTCACAAAACATCAAGGAAGTTCTACTC
TTTCCAGCCATGAAACCACAGGATGAGCCACCTTCCAAGGAAAGCAATAAAAAGCCTCAG
GAGGAATCTGCCAAGCTTCACGATGGACAAGCAAAACCTCAGGATGGACCTACAACACAA
GATGTGGAAAAGCAGGTGTCACAGCTCACAATGAAGTGA

Peptide Sequence

PEP ID

XP_016440512.1
PEP Infomation

PREDICTED: lysine--tRNA ligase-like [Nicotiana tabacum]
Sequence

MENPEKKGKSENKDKKGKSENKPSTQSQKHAAAGDEDMDPTQYFENRLKALEAEKATGKN
PYPHKFEHKVELLSIPDYVKKYGVLESGAHSADEVSLAGRIMNKRASSAKLLFYDLHGGG
AKVQVMASARDSELNEDVFIKFHSGVKRGDIVGITGCPGKSKRGELSIFPKSFEVLSHCL
HMMPRQKGAQTDTTKKIEAWVPGSGRNPDTYVLKDQETRYRQRYLDLMLNLEIRHIFKTR
TKIITYIRSFLDNRDFLEVETPMMNMIAGGAAARPFVTHHNDLNMRLFMRIAPELYLKEL
VVGGLDRVYEIGKQFRNEGIDLTHNPEFTTCEFYMAYADYNDLMDLTEKMLSGMVKELTG
GYIIKYHAKGLENDPIEIDFTPPFRRIDMVEELEKVANLNIPKDLSSVEANKYLIDACAK
LEIKCPPPQTTARLLDKLVGNFLEETCVNPAFIINHPEIMSPLAKWHRLKPGLTERFELF
INKHELCNAYTELNDPVVQRQRFADQLKDRQSGDDEAMALDENFCTALEYGLPPTGGWGL
GIDRLAMLLTDSQNIKEVLLFPAMKPQDEPPSKESNKKPQEESAKLHDGQAKPQDGPTTQ
DVEKQVSQLTMK

Transcript Sequence

Gene sequence data has not been registered.